| This is part of the opes module | |
| It is only available if you configure PLUMED with ./configure –enable-modules=opes . Furthermore, this feature is still being developed so take care when using it and report any problems on the mailing list. |
Expand a simulation to sample multiple temperatures and pressures.
The potential ENERGY, \(E\), and the VOLUME, \(V\), of the system should be used as ARG.
\[ \Delta u_{\beta',p'}=(\beta-\beta') E + (\beta p -\beta' p') V\, . \]
If instead you wish to sample multiple temperatures and a single pressure, you should use ECV_MULTITHERMAL with as ARG the internal energy \(U=E+pV\).
The TEMP_STEPS and PRESSURE_STEPS are automatically guessed from the initial unbiased steps (see OBSERVATION_STEPS in OPES_EXPANDED), unless explicitly set. The algorithm for this guess is described in [Invernizzi2020unified] should provide a rough estimate useful for most applications. The pressures are uniformely spaced, while the temperatures steps are geometrically spaced. Use instead the keyword NO_GEOM_SPACING for a linear spacing in inverse temperature (beta). For more detailed control you can use instead TEMP_SET_ALL and/or PRESSURE_SET_ALL to explicitly set all of them. The temperatures and pressures are then combined in a 2D grid.
You can use CUT_CORNER to avoid a high-temperature/low-pressure region. This can be useful e.g. to increase the temperature for greater ergodicity, while avoiding water to vaporize, as in Ref.[Invernizzi2020unified].
You can reweight the resulting simulation at any temperature and pressure in chosen target, using e.g. REWEIGHT_TEMP_PRESS. A similar target distribution can be sampled using TD_MULTITHERMAL_MULTIBARIC.
ene: ENERGY vol: VOLUME ecv: ECV_MULTITHERMAL_MULTIBARIC ...ARG=ene,volcompulsory keyword the labels of the potential energy and of the volume of the system.TEMP=500compulsory keyword ( default=-1 ) temperature.TEMP_MIN=270the minimum of the temperature rangeTEMP_MAX=800the maximum of the temperature rangePRESSURE=0.06022140857*2000 #2 kbarcompulsory keyword pressure.PRESSURE_MIN=0.06022140857 #1 barthe minimum of the pressure rangePRESSURE_MAX=0.06022140857*4000 #4 kbarthe maximum of the pressure rangeCUT_CORNER=500,0.06022140857,800,0.06022140857*1000 ... opes: OPES_EXPANDEDavoid region of high temperature and low pressure.ARG=ecv.*compulsory keyword the label of the ECVs that define the expansion.FILE=DeltaF.datacompulsory keyword ( default=DELTAFS ) a file with the estimate of the relative \f$\Delta F\f$ for each component of the target and of the global \f$c(t)\f$PACE=500compulsory keyword how often the bias is updatedWALKERS_MPI( default=off ) switch on MPI version of multiple walkers
Notice that \(p=0.06022140857\) corresponds to 1 bar only when using the default PLUMED units. If you modify them via the UNITS command, then the pressure has to be rescaled accordingly.
| TEMP | ( default=-1 ) temperature. If not specified tries to get it from MD engine |
| ARG | the labels of the potential energy and of the volume of the system. You can calculate them with ENERGY and VOLUME respectively |
| PRESSURE | pressure. Use the proper units |
| NUMERICAL_DERIVATIVES | ( default=off ) calculate the derivatives for these quantities numerically |
| NO_GEOM_SPACING | ( default=off ) do not use geometrical spacing in temperature, but instead linear spacing in inverse temperature |
| TEMP_MIN | the minimum of the temperature range |
| TEMP_MAX | the maximum of the temperature range |
| TEMP_STEPS | the number of steps in temperature |
| TEMP_SET_ALL | manually set all the temperatures |
| PRESSURE_MIN | the minimum of the pressure range |
| PRESSURE_MAX | the maximum of the pressure range |
| PRESSURE_STEPS | the number of steps in pressure |
| PRESSURE_SET_ALL | manually set all the pressures |
| SET_ALL_TEMP_PRESSURE | manually set all the target temperature_pressure pairs. An underscore separates temperature and pressure, while different points are comma-separated, e.g.: temp1_pres1,temp1_pres2,... |
| CUT_CORNER | avoid region of high temperature and low pressure. Exclude all points below a line in the temperature-pressure plane, defined by two points: \(T_{\text{low}},P_{\text{low}},T_{\text{high}},P_{\text{high}}\) |