MueLu Version of the Day
Loading...
Searching...
No Matches
MueLu_AmesosSmoother.cpp
Go to the documentation of this file.
1// @HEADER
2//
3// ***********************************************************************
4//
5// MueLu: A package for multigrid based preconditioning
6// Copyright 2012 Sandia Corporation
7//
8// Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
9// the U.S. Government retains certain rights in this software.
10//
11// Redistribution and use in source and binary forms, with or without
12// modification, are permitted provided that the following conditions are
13// met:
14//
15// 1. Redistributions of source code must retain the above copyright
16// notice, this list of conditions and the following disclaimer.
17//
18// 2. Redistributions in binary form must reproduce the above copyright
19// notice, this list of conditions and the following disclaimer in the
20// documentation and/or other materials provided with the distribution.
21//
22// 3. Neither the name of the Corporation nor the names of the
23// contributors may be used to endorse or promote products derived from
24// this software without specific prior written permission.
25//
26// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
27// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
28// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
29// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
30// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
31// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
32// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
33// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
34// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
35// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
36// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
37//
38// Questions? Contact
39// Jonathan Hu (jhu@sandia.gov)
40// Andrey Prokopenko (aprokop@sandia.gov)
41// Ray Tuminaro (rstumin@sandia.gov)
42//
43// ***********************************************************************
44//
45// @HEADER
46#include <algorithm>
47
48#include "MueLu_ConfigDefs.hpp"
49
50#if defined(HAVE_MUELU_EPETRA) && defined(HAVE_MUELU_AMESOS)
51
52#include <Epetra_LinearProblem.h>
53
54#include <Amesos_config.h>
55#include <Amesos.h>
56#include <Amesos_BaseSolver.h>
57
59
60#include "MueLu_Level.hpp"
61#include "MueLu_Utilities.hpp"
62#include "MueLu_Monitor.hpp"
63
64namespace MueLu {
65
66 template <class Node>
67 AmesosSmoother<Node>::AmesosSmoother(const std::string& type, const Teuchos::ParameterList& paramList)
68 : type_(type) {
69 this->SetParameterList(paramList);
70
71 if (!type_.empty()) {
72 // Transform string to "Abcde" notation
73 std::transform(type_.begin(), type_.end(), type_.begin(), ::tolower);
74 std::transform(type_.begin(), ++type_.begin(), type_.begin(), ::toupper);
75 }
76 if (type_ == "Amesos_klu") type_ = "Klu";
77 if (type_ == "Klu2") type_ = "Klu";
78 if (type_ == "Amesos_umfpack") type_ = "Umfpack";
79 if (type_ == "Superlu_dist") type_ = "Superludist";
80 if (type_ == "Amesos_mumps") type_ = "Mumps";
81
82 // Try to come up with something availble
83 // Order corresponds to our preference
84 // TODO: It would be great is Amesos provides directly this kind of logic for us
85 std::string oldtype = type_;
86 if (type_ == "" || Amesos().Query(type_) == false) {
87#if defined(HAVE_AMESOS_SUPERLU)
88 type_ = "Superlu";
89#elif defined(HAVE_AMESOS_KLU)
90 type_ = "Klu";
91#elif defined(HAVE_AMESOS_SUPERLUDIST)
92 type_ = "Superludist";
93#elif defined(HAVE_AMESOS_UMFPACK)
94 type_ = "Umfpack";
95#else
96 this->declareConstructionOutcome(true, "Amesos has been compiled without SuperLU_DIST, SuperLU, Umfpack or Klu. By default, MueLu tries" +
97 "to use one of these libraries. Amesos must be compiled with one of these solvers, " +
98 "or a valid Amesos solver has to be specified explicitly.");
99 return;
100#endif
101 if (oldtype != "")
102 this->GetOStream(Warnings0) << "MueLu::AmesosSmoother: \"" << oldtype << "\" is not available. Using \"" << type_ << "\" instead" << std::endl;
103 else
104 this->GetOStream(Runtime1) << "MueLu::AmesosSmoother: using \"" << type_ << "\"" << std::endl;
105 }
106 this->declareConstructionOutcome(false, "");
107 }
108
109 template <class Node>
110 void AmesosSmoother<Node>::DeclareInput(Level &currentLevel) const {
111 this->Input(currentLevel, "A");
112 }
113
114 template <class Node>
115 void AmesosSmoother<Node>::Setup(Level& currentLevel) {
116 FactoryMonitor m(*this, "Setup Smoother", currentLevel);
117
118 if (SmootherPrototype::IsSetup() == true)
119 this->GetOStream(Warnings0) << "MueLu::AmesosSmoother::Setup(): Setup() has already been called" << std::endl;
120
121 A_ = Factory::Get< RCP<Matrix> >(currentLevel, "A");
122
123 RCP<Epetra_CrsMatrix> epA = Utilities::Op2NonConstEpetraCrs(A_);
124 linearProblem_ = rcp( new Epetra_LinearProblem() );
125 linearProblem_->SetOperator(epA.get());
126
127 Amesos factory;
128 prec_ = rcp(factory.Create(type_, *linearProblem_));
129 TEUCHOS_TEST_FOR_EXCEPTION(prec_ == Teuchos::null, Exceptions::RuntimeError, "MueLu::AmesosSmoother::Setup(): Solver '" + type_ + "' not supported by Amesos");
130
131 // set Reindex flag, if A is distributed with non-contiguous maps
132 // unfortunately there is no reindex for Amesos2, yet. So, this only works for Epetra based problems
133 if (A_->getRowMap()->isDistributed() == true && A_->getRowMap()->isContiguous() == false)
134 const_cast<ParameterList&>(this->GetParameterList()).set("Reindex", true);
135
136 const ParameterList& paramList = this->GetParameterList();
137 RCP<ParameterList> precList = this->RemoveFactoriesFromList(paramList);
138
139 prec_->SetParameters(*precList);
140
141 const_cast<ParameterList&>(paramList).setParameters(*precList);
142
143 int r = prec_->NumericFactorization();
144 TEUCHOS_TEST_FOR_EXCEPTION(r != 0, Exceptions::RuntimeError, "MueLu::AmesosSmoother::Setup(): Amesos solver returns value of " +
145 Teuchos::toString(r) + " during NumericFactorization()");
146
148 }
149
150 template <class Node>
151 void AmesosSmoother<Node>::Apply(MultiVector& X, const MultiVector& B, bool InitialGuessIsZero) const {
152 TEUCHOS_TEST_FOR_EXCEPTION(SmootherPrototype::IsSetup() == false, Exceptions::RuntimeError, "MueLu::AmesosSmoother::Apply(): Setup() has not been called");
153
156 //Epetra_LinearProblem takes the right-hand side as a non-const pointer.
157 //I think this const_cast is safe because Amesos won't modify the rhs.
158 Epetra_MultiVector &nonconstB = const_cast<Epetra_MultiVector&>(epB);
159
160 linearProblem_->SetLHS(&epX);
161 linearProblem_->SetRHS(&nonconstB);
162
163 prec_->Solve();
164
165 // Don't keep pointers to our vectors in the Epetra_LinearProblem.
166 linearProblem_->SetLHS(0);
167 linearProblem_->SetRHS(0);
168 }
169
170 template <class Node>
171 RCP<MueLu::SmootherPrototype<double,int,int,Node> > AmesosSmoother<Node>::Copy() const {
172 return rcp( new AmesosSmoother<Node>(*this) );
173 }
174
175 template <class Node>
177 std::ostringstream out;
179 out << "{type = " << type_ << "}";
180 return out.str();
181 }
182
183 //using MueLu::Describable::describe; // overloading, not hiding
184 template <class Node>
185 void AmesosSmoother<Node>::print(Teuchos::FancyOStream& out, const VerbLevel verbLevel) const {
187
188 if (verbLevel & Parameters0)
189 out0 << "Prec. type: " << type_ << std::endl;
190
191 if (verbLevel & Parameters1) {
192 out0 << "Parameter list: " << std::endl;
193 Teuchos::OSTab tab2(out);
194 out << this->GetParameterList();
195 }
196
197 if (verbLevel & External)
198 if (prec_ != Teuchos::null) {
199 prec_->PrintStatus();
200 prec_->PrintTiming();
201 }
202
203 if (verbLevel & Debug) {
204 out0 << "IsSetup: " << Teuchos::toString(SmootherPrototype::IsSetup()) << std::endl
205 << "-" << std::endl
206 << "RCP<A_>: " << A_ << std::endl
207 << "RCP<linearProblem__>: " << linearProblem_ << std::endl
208 << "RCP<prec_>: " << prec_ << std::endl;
209 }
210 }
211
212 template <class Node>
214 // FIXME: This is a placeholder
215 return Teuchos::OrdinalTraits<size_t>::invalid();
216 }
217
218
219
220} // namespace MueLu
221
222// The AmesosSmoother is only templated on the Node, since it is an Epetra only object
223// Therefore we do not need the full ETI instantiations as we do for the other MueLu
224// objects which are instantiated on all template parameters.
225#if defined(HAVE_MUELU_EPETRA)
227#endif
228
229
230#endif // HAVE_MUELU_EPETRA && HAVE_MUELU_AMESOS
#define MUELU_DESCRIBE
Helper macro for implementing Describable::describe() for BaseClass objects.
Amesos_BaseSolver * Create(const char *ClassType, const Epetra_LinearProblem &LinearProblem)
Class that encapsulates Amesos direct solvers.
AmesosSmoother(const std::string &type="", const Teuchos::ParameterList &paramList=Teuchos::ParameterList())
Constructor.
std::string description() const
Return a simple one-line description of this object.
std::string type_
amesos-specific key phrase that denote smoother type
size_t getNodeSmootherComplexity() const
Get a rough estimate of cost per iteration.
void Setup(Level &currentLevel)
Set up the direct solver. This creates the underlying Amesos solver object according to the parameter...
RCP< SmootherPrototype > Copy() const
void print(Teuchos::FancyOStream &out, const VerbLevel verbLevel=Default) const
Print the object with some verbosity level to an FancyOStream object.
void DeclareInput(Level &currentLevel) const
Input.
void Apply(MultiVector &X, const MultiVector &B, bool=false) const
Apply the direct solver.
virtual std::string description() const
Return a simple one-line description of this object.
Exception throws to report errors in the internal logical of the program.
Timer to be used in factories. Similar to Monitor but with additional timers.
T Get(Level &level, const std::string &varName) const
Class that holds all level-specific information.
virtual void SetParameterList(const Teuchos::ParameterList &paramList)
Set parameters from a parameter list and return with default values.
void declareConstructionOutcome(bool fail, std::string msg)
bool IsSetup() const
Get the state of a smoother prototype.
static RCP< Epetra_MultiVector > MV2NonConstEpetraMV(RCP< Xpetra::MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > > vec)
static RCP< Epetra_CrsMatrix > Op2NonConstEpetraCrs(RCP< Xpetra::Matrix< Scalar, LocalOrdinal, GlobalOrdinal, Node > > Op)
static RCP< const Epetra_MultiVector > MV2EpetraMV(RCP< Xpetra::MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > > const vec)
Helper utility to pull out the underlying Epetra objects from an Xpetra object.
Teuchos::FancyOStream & GetOStream(MsgType type, int thisProcRankOnly=0) const
Get an output stream for outputting the input message type.
Namespace for MueLu classes and methods.
@ Warnings0
Important warning messages (one line)
@ Debug
Print additional debugging information.
@ External
Print external lib objects.
@ Runtime1
Description of what is happening (more verbose)
@ Parameters0
Print class parameters.
@ Parameters1
Print class parameters (more parameters, more verbose)